How to Calculate an S Corporation Owner’s Basis (and Why It Matters)

Keeping track of your basis is essential if you own an S corporation. It affects whether you can deduct losses, whether your distributions are tax-free, and how much tax you’ll owe when you sell your stock. Unlike C corporations, where stock basis doesn’t change much, S corp owners see their basis go up and down depending on the company’s income, losses, and distributions.

Two Types of Basis: Stock Basis vs. Debt Basis

As an S corp shareholder, you have two types of basis:

  1. Stock Basis – This starts with the amount you paid for your stock or the property value you contributed to the company.
  2. Debt Basis – If you personally lend money to the S corp, you get debt basis. (But just guaranteeing a loan from a bank? That doesn’t count.)

You need stock or debt basis to deduct losses, and your basis also determines if distributions are tax-free or taxable.

How Basis Changes Over Time

What Increases Basis?

  • Your share of S corp income (both ordinary and separately stated items).
  • Tax-exempt income (like municipal bond interest).
  • Additional capital contributions you make to the company.

What Decreases Basis? (In This Order)

  1. Distributions – These are tax-free until you run out of basis. If you take out more than your basis, the extra amount is taxable as a capital gain (usually long-term if you’ve held the stock for over a year).
  2. Nondeductible expenses – Some expenses, like penalties and certain meals, reduce basis even though you can’t deduct them.
  3. Losses and deductions – You can only deduct losses if you have enough basis. Any loss that exceeds your basis gets suspended until you get more basis in a future year.

What About Debt Basis?

  • If you run out of stock basis but still have debt basis, you can use it to deduct losses.
  • Loan repayments reduce debt basis first, which can trigger taxable income if you deducted losses against that debt in prior years.

Example: How Basis Works in Real Life

Let’s say you start an S corp and invest $50,000.

Year 1:

  • The S corp earns $30,000.
  • You take a $70,000 distribution.

Stock Basis Calculation:

  • Starting stock basis: $50,000
  • Add income: +30,000 → New basis: $80,000
  • Subtract distribution: −70,000
    • Since basis is $80,000, you have enough to cover it, and the distribution is tax-free.
    • New basis: $10,000

Year 2:

  • The S corp has a $20,000 loss.
  • You take another $15,000 distribution.

Stock Basis Calculation:

  • Starting basis: $10,000
  • Subtract loss: −10,000 → New basis: $0 (loss limited to available basis).
  • Subtract distribution: −15,000
    • Now you’ve gone below zero! The extra $15,000 is taxable as a capital gain.

Key Takeaways

  • Distributions are tax-free only up to your basis—anything extra is a capital gain.
  • You can’t deduct losses beyond your basis—excess losses get carried forward until basis is restored.
  • Loan repayments can be taxable if you’ve used debt basis to deduct losses in the past.
  • Keeping good records of your basis will help you avoid unexpected tax surprises!

Basis tracking might not be the most exciting part of owning an S corp, but it’s critical for managing your taxes. Keep an eye on it, and you’ll avoid nasty surprises at tax time.

Author: Jim Payne

Jim Payne, a Florida Certified Public Accountant (CPA) since 1976, offers candid insights on getting square with the IRS — with the least pain, and at the lowest cost — with (or without) the help of a tax representative. Mr. Payne is a former IRS agent and expert in business profitability, IRS audits, IRS payroll tax, and IRS non-filer issues. As a Tax Representative, his goal is clear: " I will speak on your behalf to all IRS agents, so you never have to, and I'll guide you in executing a strategy to resolve your IRS problem so you can get back to enjoying life."

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